Download

Reference Species Source
Inparanoid orthology assignments
(file format)
Arabidopsis thaliana[download] AtGDB 110507 Download
Plasmodium falciparum 3D7[download] PlasmoDB v.5.4(240907) Download
Toxoplasma gondii ME49[download] ToxoDB v.4.3(011107) Download
Leishmania major strain Friedlin[download] EMBL 241207 Download
Saccharomyces cerevisiae[download] SGD 121207 Download
Schizosaccharomyces pombe[download] SANGER v.19(230108) Download
Caenorhabditis elegans[download] WormBase v.190(250408) Download
Schistosoma mansonii[download] ENSEMBL ASM23792v2.23 Download
Drosophila melanogaster[download] FlyBase v.5.21(040909) Download
Danio rerio[download] ENSEMBL 231107 Download
Mus musculus[download] ENSEMBL v.56(230909) Download
Homo sapiens[download] ENSEMBL v.56(230909) Download
Target Species Source
Populus balsamifera[download] JGI v.1.0(0604)
Vitis vinifera[download] PlantGDB v.173(260809)
Oryza sativa japonica[download] EMBL 251207
Oryza sativa indica[download] NCBI 60709
Bigelowiella natans CCMP2755[download] ENSEMBL v.76.1(210814)
Chlamydomonas reinhardtii[download] JGI v.3.1
Cyanidioschyzon merolae[download] Cyanidioschyzon merolae Genome Project 180108
Ostreococcus lucimarinus CCE9901[download] JGI v.2(230107)
Ostreococcus tauri[download] JGI v.2(070706)
Phytophthora ramorum[download] JGI v.1.1(0804)
Phytophthora sojae[download] JGI v.1.1(0804)
Phytophthora infestans[download] Broad Institute 70709
Thalassiosira pseudonana CCMP1335[download] JGI v.3.0(140906)
Emiliania huxleyi[download] ENSEMBL v.76.1(210814)
Tetrahymena thermophilia[download] NCBI (TIGR v.2008)
Paramecium tetraurelia[download] ParameciumDB v.1.15(020108)
Plasmodium berghei[download] PlasmoDB v.5.4(240907)
Plasmodium chabaudi[download] PlasmoDB v.5.4(240907)
Plasmodium knowlesi strain H[download] PlasmoDB v.5.4(101007)
Plasmodium vivax[download] PlasmoDB v.5.4(240907)
Plasmodium yoelii yoelii[download] PlasmoDB v.5.4(240907)
Theileria annulata Ankara clone C9[download] ApiDB 0
Theileria parva strain Muguga[download] GenBank 220108
Sarcocystis neurona[download] ToxoDB v.1.0(2014)
Eimeria tenella[download] The Eimeria Transcript Database v.1.1(2012)
Cryptosporidium hominis TU502[download] CryptoDB 131107
Cryptosporidium parvum Iowa II[download] CryptoDB 131107
Leishmania braziliensis[download] EMBL 251207
Leishmania infantum[download] EMBL 251207
Trypanosoma brucei[download] SANGER 110506
Giardia lamblia[download] GiardiaDB 92707
Guillardia theta[download] EMBL 290909
Trichomonas vaginalis[download] TrichDB v.1.1(250609)
Naegleria gruberi[download] Superfamily v.1.75(2013)
Entamoeba histolytica HM-1:IMSS[download] SANGER 211005
Dictyostelium discoideum[download] dictyBase 41009
Encephalitozoon cuniculi GB-M1[download] EMBL 241207
Rhizopus oryzae[download] Broad Institute v.1.2a
Wallemia ichthyophaga[download] NCBI PRJNA193177
Neurospora crassa[download] Broad Institute 70507
Ophiostoma ulmi[download] Moses Lab v.1(271211)
Magnaporthe grisea 70-15[download] Broad Institute v.5(070507)
Fusarium graminearum (Gibberella zeae PH-1)[download] Broad Institute 240406
Aspergillus flavus[download] Broad Institute 210108
Aspergillus oryzae RIB40[download] Jason 220106
Aspergillus terreus NIH2624[download] Broad Institute 300108
Aspergillus niger[download] Broad Institute 210108
Aspergillus fischeri[download] Broad Institute 210108
Aspergillus fumigatus Af293[download] EMBL 241207
Aspergillus clavatus[download] Broad Institute 210108
Aspergillus (Emericella) nidulans FGSC A4[download] Broad Institute 210108
Pichia stipitis[download] EMBL 241207
Vanderwaltozyma polyspora DSM 70294[download] EMBL 251207
Debaryomyces hansenii CBS767[download] EMBL 251207
Pichia pastoris[download] UGENT GS115(0509)
Candida albicans WO-1[download] Broad Institute 70507
Candida glabrata CBS 138[download] EMBL 241207
Ashbya gossypii ATCC 10895[download] EMBL 251207
Kluyveromyces lactis NRRL Y-1140[download] EMBL 251207
Yarrowia lipolytica CLIB122[download] EMBL 241207
Phanerochaete chrysosporium RP-78[download] JGI v.2(0205)
Cryptococcus neoformans var. grubii H99[download] Broad Institute 360406
Cryptococcus neoformans var. neoformans B-3501A[download] EMBL 251207
Cryptococcus neoformans var. neoformans JEC21[download] EMBL 251207
Postia placenta[download] JGI MAD698(20090305)
Ustilago maydis 521[download] Broad Institute 260406
Puccinia graminis[download] ENSEMBL v.76.1
Coprinopsis cinerea[download] Broad Institute 220814
Stereum hirsutum[download] Superfamily v.1.0
Agaricus bisporus var bisporus (H97)[download] Superfamily 210814
Laccaria bicolor[download] JGI V.1.0(2008)
Monosiga brevicollis[download] JGI v1.0(240310)
Amphimedon queenslandica[download] NCBI (7/27/2011)
Trichoplax adhaerens[download] JGI Grell-BS-1999 v1.0
Hydra magnipapillata[download] NCBI (1/26/2009)
Nematostella vectensis[download] JGI v.1
Caenorhabditis angaria[download] WormBase WS229
Caenorhabditis briggsae[download] WormBase WS206(290809)
Caenorhabditis brenneri[download] WormBase WS206(290809)
Caenorhabditis japonica[download] WormBase WS206(200809)
Caenorhabditis remanei[download] WormBase WS206(290809)
Pristionchus pacificus[download] WormBase WS205(300709)
Haemonchus contortus[download] WormBase WS243
Bursaphelenchus xylophilus[download] WormBase WS229
Meloidogyne hapla[download] WormBase WS229
Meloidogyne incognita[download] WormBase WS226
Ascaris suum[download] WormBase WS229
Brugia malayi[download] WormBase WS200(240209)
Trichinella spiralis[download] WormBase WS229
Trichuris trichiura[download] NCBI TTRE2.1
Trichuris muris[download] SANGER 2.1
Crassostrea gigas[download] GigaDB v.9
Lottia gigantea[download] ENSEMBL GCA_000327385.1.23
Helobdella robusta[download] ENSEMBL GCA_0003268651.1.23
Taenia solium[download] SANGER TsM1_13.12.11
Echinococcus multilocularis[download] SANGER v3
Echinococcus granulosus[download] SANGER v3
Capitella teleta[download] ENSEMBL GCA_000328365.1.23
Daphnia pulex[download] ENSEMBL GCA_000187875.1.23
Pediculus humanus[download] VectorBase PhumU2.1
Aedes aegypti[download] VectorBase V.AaegL1.48
Anopheles gambiae str. PEST[download] ENSEMBL 231107
Culex pipiens[download] Broad Institute 70709
Solenopsis invicta[download] Ant Genomes Portal SI2.2.3
Apis mellifera DH4[download] BeeBase PreRelease2
Bombyx mori[download] SilkDB 2004
Glossina morsitans[download] VectorBase GmorY1.4
Drosophila ananassae[download] FlyBase v.1.3(250609)
Drosophila sechellia[download] FlyBase v.1.3(250609)
Drosophila simulans[download] FlyBase v.1.3(250609)
Drosophila yakuba[download] FlyBase v.1.3(250609)
Drosophila erecta[download] FlyBase v.1.3(250609)
Drosophila persimilis[download] FlyBase v.1.3(250609)
Drosophila pseudoobscura[download] FlyBase v.2.6(010909)
Drosophila willistoni[download] FlyBase v.1.3(250609)
Drosophila virilis[download] FlyBase v.1.2(250609)
Drosophila mojavensis[download] FlyBase v.1.3(250609)
Drosophila grimshawi[download] FlyBase v.1.3(250609)
Branchiostoma floridae[download] NCBI GCA_000003815.1_V2
Strongylocentrotus purpuratus[download] SpBase 90312
Ciona intestinalis[download] ENSEMBL 221107
Ciona savignyi[download] ENSEMBL 221107
Petromyzon marinus[download] ENSEMBL v.7.0(230914)
Oryzias latipes[download] ENSEMBL 261107
Takifugu rubripes[download] ENSEMBL 301107
Tetraodon nigroviridis[download] ENSEMBL 301107
Gasterosteus aculeatus[download] ENSEMBL 231107
Xenopus laevis[download] Xenbase v.6.0(140313)
Xenopus tropicalis[download] ENSEMBL 231107
Gallus gallus[download] ENSEMBL 301107
Ornithorhynchus anatinus[download] ENSEMBL 251107
Loxodonta africana[download] ENSEMBL 301107
Dasypus novemcinctus[download] ENSEMBL 251107
Echinops telfairi[download] ENSEMBL 251107
Erinaceus europaeus[download] ENSEMBL 241107
Sorex araneus[download] ENSEMBL 251107
Tupaia belangeri[download] ENSEMBL 261107
Myotis lucifugus[download] ENSEMBL 160108
Equus caballus[download] NCBI v.EquCab1 (020707 )
Bos taurus[download] ENSEMBL 281107
Felis catus[download] ENSEMBL 61207
Canis lupus familiaris[download] ENSEMBL 301107
Oryctolagus cuniculus[download] ENSEMBL 301107
Cavia porcellus[download] ENSEMBL 241107
Ochotona princeps[download] ENSEMBL 251107
Spermophilus tridecemlineatus[download] ENSEMBL 301107
Rattus norvegicus[download] ENSEMBL v.56(230909)
Monodelphis domestica[download] ENSEMBL 301107
Otolemur garnettii[download] ENSEMBL 261107
Microcebus murinus[download] ENSEMBL 301107
Macaca mulatta[download] ENSEMBL 241107
Pan troglodytes[download] ENSEMBL 301107